Simulator for gene expression networks

Hugo A. Armelin; Junior Barrera; Edward R. Dougherty; Joao E. Ferreira; Marco D. Gubitoso; Nina Sumiko Tomita Hirata; Eduardo J. Neves

doi:10.1117/12.427995

4 June 2001 Simulator for gene expression networks

Hugo A. Armelin, Junior Barrera, Edward R. Dougherty, Joao E. Ferreira, Marco D. Gubitoso, Nina Sumiko Tomita Hirata, Eduardo J. Neves

Author Affiliations +

Proceedings Volume 4266, Microarrays: Optical Technologies and Informatics; (2001) https://doi.org/10.1117/12.427995
Event: BiOS 2001 The International Symposium on Biomedical Optics, 2001, San Jose, CA, United States

Abstract

This paper presents a simulator for gene expression networks, based on the model of chain dynamical systems (CDS). It gives the definition of CDS, describes the simulator architecture, the language adopted for describing CDS, and the available outputs. Finally, a real genetic network is studied: a subsystem of the genetic network that controls cell cycle of adrenocortical cells of the Y1 cultured cell line.

Citation Download Citation

Hugo A. Armelin, Junior Barrera, Edward R. Dougherty, Joao E. Ferreira, Marco D. Gubitoso, Nina Sumiko Tomita Hirata, and Eduardo J. Neves "Simulator for gene expression networks", Proc. SPIE 4266, Microarrays: Optical Technologies and Informatics, (4 June 2001); https://doi.org/10.1117/12.427995

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