Journal of Biomedical Optics
VOL. 18 · NO. 7 | July 2013
CONTENTS
Research Papers: General
Sang Seok Hwang, Jeong Eun Kim, Bong-Kwon Chun, Sangbong Jung, Eun-Kee Park, Hu-Jang Lee, Mannhohng Jung, Sang-Joon Lee, Gwang Myung Noh, Rangarirai Masanganise, Chulho Oak, Yeh-Chan Ahn
Journal of Biomedical Optics, Vol. 18, Issue 07, 070501, (July 2013) https://doi.org/10.1117/1.JBO.18.7.070501
Open Access
TOPICS: Tumors, Optical coherence tomography, Tumor growth modeling, Eye models, Medicine, Animal model studies, Cancer, Visualization, Biomedical optics, Pathology
JBO Letters
Daniele Piras, Chiel Grijsen, Peter Schutte, Wiendelt Steenbergen, Srirang Manohar
Journal of Biomedical Optics, Vol. 18, Issue 07, 070502, (July 2013) https://doi.org/10.1117/1.JBO.18.7.070502
Open Access
TOPICS: Biopsy, Heart, Tissue optics, Photoacoustic spectroscopy, Optical properties, Biomedical optics, Signal detection, Ultrasonography, Breast, Imaging systems
Zijian Deng, Honghong Zhao, Qiushi Ren, Changhui Li
Journal of Biomedical Optics, Vol. 18, Issue 07, 070503, (July 2013) https://doi.org/10.1117/1.JBO.18.7.070503
Open Access
TOPICS: Acquisition tracking and pointing, Ultrasonography, Transducers, Signal detection, Photoacoustic tomography, Reflectors, Ultrasonics, Acoustics, Imaging systems, Reflection
Ran An, Ghadeer Khadar, Emilia Wilk, Brent Emigh, Harold Haugen, Gregory Wohl, Brett Dunlop, Mehran Anvari, Joseph Hayward, Qiyin Fang
Journal of Biomedical Optics, Vol. 18, Issue 07, 070504, (July 2013) https://doi.org/10.1117/1.JBO.18.7.070504
Open Access
TOPICS: Laser ablation, Bone, Ultrafast lasers, Laser therapeutics, Laser tissue interaction, Computed tomography, Surgery, Physics, Ultrafast phenomena, Tissues
Research Papers: General
Ammar Abdo, Ali Ersen III, Mesut Sahin
Journal of Biomedical Optics, Vol. 18, Issue 07, 075001, (July 2013) https://doi.org/10.1117/1.JBO.18.7.075001
Open Access
TOPICS: Brain, Scattering, Tissue optics, Monte Carlo methods, Light scattering, In vitro testing, Near infrared, Transmittance, Laser scattering, Optical testing
Journal of Biomedical Optics, Vol. 18, Issue 07, 075002, (July 2013) https://doi.org/10.1117/1.JBO.18.7.075002
Open Access
TOPICS: Skin, Tissues, Monte Carlo methods, Photodynamic therapy, Natural surfaces, Laser induced fluorescence, Temperature metrology, Thermal modeling, Luminescence, Optical simulations
Ting Si, Leilei Zhang, Guangbin Li, Cynthia Roberts, Xiezhen Yin, Ronald Xu
Journal of Biomedical Optics, Vol. 18, Issue 07, 075003, (July 2013) https://doi.org/10.1117/1.JBO.18.7.075003
Open Access
TOPICS: Liquids, Electrodes, Multilayers, Biological research, Multimodal imaging, Analytical research, Nanoparticles, Interfaces, Therapeutic agents, Custom fabrication
Yi-Cheng Li, Li-Chung Cheng, Chia-Yuan Chang, Chun-Yu Lin, Nan-Shan Chang, Paul Campagnola, Chen-Yuan Dong, Shean-Jen Chen
Journal of Biomedical Optics, Vol. 18, Issue 07, 075004, (July 2013) https://doi.org/10.1117/1.JBO.18.7.075004
Open Access
TOPICS: 3D microstructuring, Pulsed laser operation, Digital micromirror devices, Optical amplifiers, Microfabrication, Beam controllers, Control systems, 3D image processing, Ultrafast phenomena, Imaging systems
Research Papers: Imaging
Ludguier Montejo, Jingfei Jia, Hyun Kim, Uwe Netz, Sabine Blaschke, Gerhard Mueller, Andreas Hielscher
Journal of Biomedical Optics, Vol. 18, Issue 07, 076001, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076001
Open Access
TOPICS: Computer aided diagnosis and therapy, Feature extraction, Magnetic resonance imaging, Selenium, Optical tomography, Data modeling, Ultrasonography, Virtual colonoscopy, Scattering, Absorption
Ludguier Montejo, Jingfei Jia, Hyun Kim, Uwe Netz, Sabine Blaschke, Gerhard Mueller, Andreas Hielscher
Journal of Biomedical Optics, Vol. 18, Issue 07, 076002, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076002
Open Access
TOPICS: Selenium, Scattering, Computer aided diagnosis and therapy, Image classification, Optical tomography, Data analysis, Neurons, Optimization (mathematics), Absorption, Magnetic resonance imaging
Adnan Mahmood, Jeffrey Grice, Michael Roberts, Tarl Prow
Journal of Biomedical Optics, Vol. 18, Issue 07, 076003, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076003
Open Access
TOPICS: Multiphoton microscopy, Blood, Luminescence, Image analysis, Scanning probe microscopy, Molecules, Sensors, Confocal microscopy, Microscopy, Bacteria
Ekaterina Grebenik, Annemarie Nadort, Alla Generalova, Andrei Nechaev, Varun Sreenivasan, Evgeny Khaydukov, Vladimir Semchishen, Alexey Popov, Viktor Sokolov, Aleksandr Akhmanov, Vitaly Zubov, Dmitry Klinov, Vladislav Panchenko, Sergey Deyev, Andrei Zvyagin
Journal of Biomedical Optics, Vol. 18, Issue 07, 076004, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076004
Open Access
TOPICS: Tissue optics, Optical imaging, Breast cancer, Breast, In vivo imaging, Absorption, Cancer, Tissues, Ytterbium, Scattering
Federico Boschi, Marco Pagliazzi, Barbara Rossi, Maria Paola Cecchini, Giancarlo Gorgoni, Matteo Salgarello, Antonello Spinelli
Journal of Biomedical Optics, Vol. 18, Issue 07, 076005, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076005
Open Access
TOPICS: Luminescence, Tissues, In vivo imaging, Radioisotopes, Visualization, Optical imaging, Imaging systems, Technetium, Photons, Cameras
Zhihong Hu, Xiaodong Wu, Amirhossein Hariri, SriniVas Sadda
Journal of Biomedical Optics, Vol. 18, Issue 07, 076006, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076006
Open Access
TOPICS: Image segmentation, Optical coherence tomography, Multilayers, Vitreous, Biological research, Eye, 3D scanning, 3D image processing, Reflectivity, Visualization
Journal of Biomedical Optics, Vol. 18, Issue 07, 076007, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076007
Open Access
TOPICS: Oxygen, Brain, Photoacoustic microscopy, Photoacoustic spectroscopy, Acoustics, Blood, Microscopes, Blood circulation, Biomedical optics, Hemodynamics
Bahar Davoudi, Melanie Morrison, Kostadinka Bizheva, Victor Yang, Robert Dinniwell, Wilfred Levin, I. Alex Vitkin
Journal of Biomedical Optics, Vol. 18, Issue 07, 076008, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076008
Open Access
TOPICS: Optical coherence tomography, Toxicity, Tissues, Blood, 3D image processing, Doppler tomography, Imaging systems, Image segmentation, Pathology, Speckle
Jang Hyuk Lee, Jong Chul Kim, Giyoong Tae, Myoung-kyu Oh, Do-Kyeong Ko
Journal of Biomedical Optics, Vol. 18, Issue 07, 076009, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076009
Open Access
TOPICS: Liver, Tissues, Nonlinear optics, Imaging systems, Multiphoton microscopy, Second-harmonic generation, Collagen, Imaging spectroscopy, Microscopy, Signal detection
Ali Behrooz, Chaincy Kuo, Heng Xu, Brad Rice
Journal of Biomedical Optics, Vol. 18, Issue 07, 076010, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076010
Open Access
TOPICS: Reconstruction algorithms, Zinc, Copper, In vivo imaging, Bioluminescence, Error analysis, 3D image processing, Tomography, Optical tomography, X-rays
Shudong Jiang, Brian Pogue, Kelly Michaelsen, Michael Jermyn, Michael Mastanduno, Tracy Frazee, Peter Kaufman, Keith Paulsen
Journal of Biomedical Optics, Vol. 18, Issue 07, 076011, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076011
Open Access
TOPICS: Tumors, Blood, Breast, Near infrared spectroscopy, Hyperoxia, Oxygen, Tissues, Breast cancer, Tomography, Hypoxia
Ben de Clercq, Bart Cleuren, Hendrik Deschout, Kevin Braeckmans, Marcel Ameloot
Journal of Biomedical Optics, Vol. 18, Issue 07, 076012, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076012
Open Access
TOPICS: Diffusion, Luminescence, Point spread functions, Particles, Data modeling, Proteins, Monte Carlo methods, Image resolution, Biomedical optics, Medical research
Condon Lau, Jelena Mirkovic, Chung-Chief Yu, Geoffrey O'Donoghue, Luis Galindo, Ramachandra Dasari, Antonio de las Morenas, Michael Feld, Elizabeth Stier
Journal of Biomedical Optics, Vol. 18, Issue 07, 076013, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076013
Open Access
TOPICS: Spectroscopy, Biopsy, Cervix, Imaging spectroscopy, Pathology, Tissue optics, Scattering, Cervical cancer, Diagnostics, Reflectivity
Daniel Queirós, Xose Luis Dean-Ben, Andreas Buehler, Daniel Razansky, Amir Rosenthal, Vasilis Ntziachristos
Journal of Biomedical Optics, Vol. 18, Issue 07, 076014, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076014
Open Access
TOPICS: 3D modeling, Transducers, Sensors, Tomography, Absorption, Imaging systems, Reconstruction algorithms, Signal detection, Systems modeling, 3D image processing
Francesco LaRocca, Al-Hafeez Dhalla, Michael Kelly, Sina Farsiu, Joseph Izatt
Journal of Biomedical Optics, Vol. 18, Issue 07, 076015, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076015
Open Access
TOPICS: Scanners, Confocal microscopy, Retina, Scanning laser ophthalmoscopes, Eye, Point spread functions, Image resolution, Laser development, Optical design, Cones
Judit Chamorro-Servent, Juan Abascal, Juan Aguirre, Simon Arridge, Teresa Correia, Jorge Ripoll, Manuel Desco, Juan Vaquero
Journal of Biomedical Optics, Vol. 18, Issue 07, 076016, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076016
Open Access
TOPICS: Denoising, Reconstruction algorithms, Luminescence, Signal to noise ratio, Diffuse optical tomography, Image restoration, Data acquisition, Image quality, Inverse problems, 3D image processing
Vicente Parot, Daryl Lim, German Gonzalez, Giovanni Traverso M.D., Norman Nishioka M.D., Benjamin Vakoc, Nicholas Durr
Journal of Biomedical Optics, Vol. 18, Issue 07, 076017, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076017
Open Access
TOPICS: Endoscopy, Light sources, Endoscopes, Tissues, Prototyping, Natural surfaces, Cameras, Colon, Picosecond phenomena, Imaging systems
Kyung-Jin Park, Hartmut Schneider, Rainer Haak
Journal of Biomedical Optics, Vol. 18, Issue 07, 076018, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076018
Open Access
TOPICS: Composites, Optical coherence tomography, Teeth, Interfaces, Adhesives, Diagnostics, Nondestructive evaluation, Microscopy, Defect detection, Statistical analysis
Qi Shao, Ekaterina Morgounova, Chunlan Jiang, Jeung-Hwan Choi, John Bischof, Shai Ashkenazi
Journal of Biomedical Optics, Vol. 18, Issue 07, 076019, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076019
Open Access
TOPICS: Tumors, Oxygen, Tissues, Imaging systems, In vivo imaging, Hypoxia, Tissue optics, Photoacoustic imaging, Photoacoustic spectroscopy, Absorption
Baba Bista, Alireza Sadr, Amir Nazari, Yasushi Shimada, Yasunori Sumi, Junji Tagami
Journal of Biomedical Optics, Vol. 18, Issue 07, 076020, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076020
Open Access
TOPICS: Adhesives, Optical coherence tomography, Interfaces, Composites, Nondestructive evaluation, Signal attenuation, Teeth, Tissues, Image analysis, Statistical analysis
Journal of Biomedical Optics, Vol. 18, Issue 07, 076021, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076021
Open Access
TOPICS: Hemodynamics, Brain, Optical imaging, Epilepsy, Somatosensory cortex, Blood circulation, Neuroimaging, Speckle, Animal model studies, Electroencephalography
Yosuke Sato, Masafumi Fukuda, Makoto Oishi, Atsushi Shirasawa, Yukihiko Fujii
Journal of Biomedical Optics, Vol. 18, Issue 07, 076022, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076022
Open Access
TOPICS: Near infrared spectroscopy, Electrodes, Shape memory alloys, Hybrid fiber optics, Hemodynamics, Cerebral blood flow, Brain, Tumors, Single photon emission computed tomography, Sensorimotor cortex
Ademar Takahama Jr., Cristina Kurachi D.D.S., Alessandro Cosci, Isabel Schausltz Pereira Faustino, Danielle Resende Camisasca, Karla B. da Costa Fontes Fontes, Fabio Ramoa Pires, Rebeca Souza Azevedo
Journal of Biomedical Optics, Vol. 18, Issue 07, 076023, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076023
Open Access
TOPICS: Laser induced plasma spectroscopy, Luminescence, Biopsy, Tissue optics, Tissues, Imaging systems, Auto-fluorescence imaging, Visualization, Image processing, Diagnostics
Yao Li, Shuping Zhu, Lu Yuan, Hongyang Lu, Hangdao Li, Shanbao Tong
Journal of Biomedical Optics, Vol. 18, Issue 07, 076024, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076024
Open Access
TOPICS: Surgery, Arteries, Speckle, Brain, Laser speckle imaging, Cerebral blood flow, Tissues, Animal model studies, Ischemia, Lithium
Journal of Biomedical Optics, Vol. 18, Issue 07, 076025, (July 2013) https://doi.org/10.1117/1.JBO.18.7.076025
Open Access
TOPICS: Angiography, Optical coherence tomography, Blood circulation, Retina, Arteries, Blood pressure, Capillaries, Veins, Optic nerve, Head
Research Papers: Sensing
Jason Maher, Jason Inzana, Hani Awad, Andrew Berger
Journal of Biomedical Optics, Vol. 18, Issue 07, 077001, (July 2013) https://doi.org/10.1117/1.JBO.18.7.077001
Open Access
TOPICS: Bone, Raman spectroscopy, Tissues, Data acquisition, Chemical analysis, Collagen, Minerals, Tissue optics, Data modeling, Algorithm development
Noah Pestana, Luke Mortensen, Judith Runnels, Dwayne Vickers, Shashi Murthy, Charles Lin, Mark Niedre
Journal of Biomedical Optics, Vol. 18, Issue 07, 077002, (July 2013) https://doi.org/10.1117/1.JBO.18.7.077002
Open Access
TOPICS: Luminescence, Prototyping, Data acquisition, In vivo imaging, Signal to noise ratio, Control systems, Flow cytometry, Signal detection, Sensors, Optical spheres
Yang Zhang, Yongjun Chen, Yuan Yu, Xingbo Xue, Valery Tuchin, Dan Zhu
Journal of Biomedical Optics, Vol. 18, Issue 07, 077003, (July 2013) https://doi.org/10.1117/1.JBO.18.7.077003
Open Access
TOPICS: Tissues, Breast, Tumors, Absorption, Scattering, Tissue optics, Statistical analysis, Visible radiation, Near infrared spectroscopy, In vitro testing
M. Hassan Arbab, Dale Winebrenner, Trevor Dickey, Antao Chen, Matthew Klein, Pierre Mourad
Journal of Biomedical Optics, Vol. 18, Issue 07, 077004, (July 2013) https://doi.org/10.1117/1.JBO.18.7.077004
Open Access
TOPICS: Skin, Terahertz radiation, Injuries, Terahertz spectroscopy, Tissues, Reflectivity, In vivo imaging, Tissue optics, Spectroscopy, Image processing
Journal of Biomedical Optics, Vol. 18, Issue 07, 077005, (July 2013) https://doi.org/10.1117/1.JBO.18.7.077005
Open Access
TOPICS: Gold, Sensors, Tissues, Nanoparticles, Target detection, Tissue optics, Prostate, Biomedical optics, Plasmons, Absorption
Research Papers: Therapeutic
Journal of Biomedical Optics, Vol. 18, Issue 07, 078001, (July 2013) https://doi.org/10.1117/1.JBO.18.7.078001
Open Access
TOPICS: Fiber lasers, YAG lasers, Laser ablation, Holmium, Optical fibers, Surface finishing, Pulsed laser operation, Cavitation, Calcium, Laser lithotripsy
Artiom Skripka, Jurga Valanciunaite, Gediminas Dauderis, Vilius Poderys, Reda Kubiliute, Ricardas Rotomskis
Journal of Biomedical Optics, Vol. 18, Issue 07, 078002, (July 2013) https://doi.org/10.1117/1.JBO.18.7.078002
Open Access
TOPICS: Cerium, Absorption, Luminescence, Molecules, Picosecond phenomena, Surface plasmons, Fluorescence resonance energy transfer, Quantum dots, Photodynamic therapy, Energy transfer
Errata
Dror Fixler, Rinat Ankri
Journal of Biomedical Optics, Vol. 18, Issue 07, 079801, (July 2013) https://doi.org/10.1117/1.JBO.18.7.079801
Open Access
TOPICS: Gold, Diffusion, Biomedical optics, Nanotechnology, Scattering, Nanorods
Book Reviews
Journal of Biomedical Optics, Vol. 18, Issue 07, 079901, (July 2013) https://doi.org/10.1117/1.JBO.18.7.079901
Open Access
TOPICS: Adaptive optics, Wavefront sensors, Space telescopes, Wavefronts, Atmospheric optics, Telescopes, Atmospheric turbulence, Refractive index, Deformable mirrors, Eye
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